PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy008917

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

WRKY

Protein Properties

Length: 370aa MW: 40371.3 Da PI: 5.2559

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59552947	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.9	6.7e-31	172	230	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp+++++tY+ eHnh+ Ahy008917 172 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRTDPTMFIVTYTAEHNHP 230 79***********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.4E-30	164	232	IPR003657	WRKY domain
PROSITE profile	PS50811	34.635	166	232	IPR003657	WRKY domain
SuperFamily	SSF118290	7.32E-26	169	232	IPR003657	WRKY domain
SMART	SM00774	2.4E-36	171	231	IPR003657	WRKY domain
Pfam	PF03106	1.1E-25	173	230	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence Send to blast
MELDWDLHAV VRGCSTLTSS SSSSSSSSSS SGFGYFYSQA SPSSVLDTED QQQQQQGITN 60 NVMSFSAASY SYPFGPRTAI EELHELCKPF FTKSLPQQQQ SLQASSPLSS FSVAPPPPPP 120 PPKPVHAQEK QQRSNTNKHP HPGGDSVNTP RSKRRKNQLK RVCQVPVENL SSDIWAWRKY 180 GQKPIKGSPY PRGYYRCSSS KGCLARKQVE RNRTDPTMFI VTYTAEHNHP APTHRNSLAG 240 STRQKPLTPQ AATATTTNGG ESDEKALTPT KSASPDISVA EEEALPQHCE KSSVSREEKG 300 EDLADDDDDD EFGLSDMVIP DDFFDSFDEL KEITGIDDDG IRGDNFFVDP FSAIAMPSWV 360 ANSAATAAGG

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence Send to blast

MELDWDLHAV VRGCSTLTSS SSSSSSSSSS SGFGYFYSQA SPSSVLDTED QQQQQQGITN  60
NVMSFSAASY SYPFGPRTAI EELHELCKPF FTKSLPQQQQ SLQASSPLSS FSVAPPPPPP  120
PPKPVHAQEK QQRSNTNKHP HPGGDSVNTP RSKRRKNQLK RVCQVPVENL SSDIWAWRKY  180
GQKPIKGSPY PRGYYRCSSS KGCLARKQVE RNRTDPTMFI VTYTAEHNHP APTHRNSLAG  240
STRQKPLTPQ AATATTTNGG ESDEKALTPT KSASPDISVA EEEALPQHCE KSSVSREEKG  300
EDLADDDDDD EFGLSDMVIP DDFFDSFDEL KEITGIDDDG IRGDNFFVDP FSAIAMPSWV  360
ANSAATAAGG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2lex_A	2e-17	169	232	15	77	Probable WRKY transcription factor 4
1wj2_A	2e-17	169	232	15	77	Probable WRKY transcription factor 4
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015961879.1	0.0	PREDICTED: WRKY transcription factor 22
TrEMBL	A0A0R4J5X0	1e-118	A0A0R4J5X0_SOYBN; Uncharacterized protein
STRING	GLYMA18G47300.1	1e-118	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	1e-69	WRKY family protein